If you are working with Avogadro, and need to reference it please use:
M. D. Hanwell, D. E. Curtis, D. C. Lonie, T. Vandermeersch, E. Zurek, and G. R. Hutchison, Avogadro: An Advanced Semantic Chemical Editor, Visualization, and Analysis Platform, J. Chem. Inf., 4 (17), (2012).
Other relevant publications that might be of interest is:
M. D. Hanwell, W. A. de Jong, C. J. Harris, Open chemistry: RESTful web APIs, JSON, NWChem and the modern web application, J. Chem. Inf., 9 (55), 2017.
W. A. de Jong, A. M. Walker, M. D. Hanwell, From Data to Analysis: Linking NWChem and Avogadro with the Syntax and Semantics of Chemical Markup Language, J. Chem. Inf., 5 (25), (2013).